SexSeek: Estimate Genetic Sex from Expression Counts

Infers the genetic sex of samples, donors or cells from bulk or single-cell RNA sequencing counts. Accepts dense or sparse matrices, delimited text files, 10x Genomics outputs, and 'Seurat', 'SingleCellExperiment' and 'SummarizedExperiment' objects.

Version:	0.1.0
Depends:	R (≥ 4.1)
Imports:	ggplot2, Matrix, methods, stats, utils
Suggests:	genevintage (≥ 0.1.3), hdf5r, knitr, rmarkdown, SeuratObject, SingleCellExperiment, SummarizedExperiment, testthat (≥ 3.0.0)
Published:	2026-11-03
DOI:	10.32614/CRAN.package.SexSeek (may not be active yet)
Author:	Saket Choudhary [aut, cre, cph]
Maintainer:	Saket Choudhary <saketc at iitb.ac.in>
BugReports:	https://github.com/saketlab/SexSeek/issues
License:	MIT + file LICENSE
URL:	https://sexseek.saketlab.org, https://github.com/saketlab/SexSeek
NeedsCompilation:	no
Language:	en-GB
Materials:	README, NEWS
CRAN checks:	SexSeek results

Documentation:

Reference manual:	SexSeek.html , SexSeek.pdf
Vignettes:	Introduction to SexSeek (source, R code)

Downloads:

Package source:	SexSeek_0.1.0.tar.gz
Windows binaries:	r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries:	r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

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